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  • Ana Sara Costa receives Doctoral Dissertation Award

    Ana Sara Costa receives Doctoral Dissertation Award

    Ana Sara Costa, an early career researcher who finished her PhD in Engineering and Management at Instituto Superior Técnico in 2020 (supervised by Professor José Figueira from CEG-IST and Professor José Borbinha from INESC-ID) has recently received the Doctoral Dissertation award at the 26th International Conference on Multiple Criteria Decision Making (University of Portsmouth, UK 26 June – 01 July 2022).

    Currently a researcher at CEG-IST and an Invited Assistant Professor at Instituto Superior Técnico, Costa wrote her thesis — A multiple criteria integrated approach for nominal classification problems: Methods and applications — with a very clear purpose: according to Costa, “to developed multicriteria decision support methods for classification problems with nominal categories [which can group objects/concepts together based on a given characteristic or property] without any order of preference between them.” These were implemented in DecSpace, an online platform where Costa provides several methods and demonstrated their applicability through three studies with different objectives and contexts: housing assignement for refugees (contributing to the definition of an urban strategy and the decision aiding process as it relates to the accommodation system) and the cultural adaptive reuse of abandoned buildings, both in the city of Turin, and a recruitment process in the Special Forces of the Portuguese Army.

    “The methods we developed make it possible to model the preferences and judgments of decision makers when comparing two decision objects in terms of similarity and dissimilarity,” Costa explains, “and it is possible to consider the effects of interaction between two criteria and the structuring of the criteria in a hierarchy. The methods have potential for application across several areas in decision-making situations that involve classification into nominal categories, considering different criteria, which can bring value to decisions in organizations.”

    What does this award mean for Ana Sara Costa? “[It] represents a recognition of the merit of my doctoral thesis, which I had the privilege of developing under the guidance of Professor José Rui Figueira and Professor José Borbinha, as well as the relevance of their contributions to the area of ​​MCDM [Multiple Criteria Decision Aiding].”

    And what about the future? “The plan is to continue performing research and teaching in this area,” Costa told us. As a true academic, she concluded “as I consider my contribution to the construction of students’ knowledge and their motivation for research to be very gratifying.”

  • Tell me what your proteome is and I’ll tell you what you are: the proteomic maps of 949 human cancer cell lines

    Tell me what your proteome is and I’ll tell you what you are: the proteomic maps of 949 human cancer cell lines

    Emanuel Gonçalves INESC-ID Automated Reasoning and Software Reliability (ARSR) computational biology researcher has published a groundbreaking study in the journal Cancer Cell (published online 14 July 2022).

    In the article Pan-cancer proteomic map of 949 human cell lines, the last study resulting from Gonçalves’ postdoctoral work at the Wellcome Sanger Institute, Gonçalves together with co-first authors Rebecca C. Poulos and Zhaoxiang Cai and an immense and interdisciplinary group of colleagues addressed one substantial gap in cancer research: until now a comprehensive characterization of the proteomes of cancer cells was lacking, an absence that substantially limited the identification of novel cancer biomarkers (the molecular signature that each tumour produces).

    To tackle this challenge, the team profiled the proteomes — the complete set of proteins expressed by a genome of 949 cancer cell lines from 28 different tissues using mass spectrometry (a technique used to identify individual molecules in a complex solution based on their unique mass-to-charge signature). Then, analysing some 8,498 proteins within an integrated strategy bringing together multi-omics with drug response and the CRISPR-Cas9 gene editing technology (to manipulate the expression of genes one by one and look at how essential each of the respectively expressed proteins was), Gonçalves and his colleagues revealed thousands of protein biomarkers of cancer vulnerabilities (those molecular changes that promote tumour development and progression, such as those in genes responsible for cell proliferation).

    “This study significantly expands our molecular knowledge of cancer cells — more than doubling the number of cancer cell lines with proteomes characterized so far — and of protein regulation in cancer,” Gonçalves shared with us. “Complementing genomics, this dataset provides unique information only captured at the protein level, which we would be missing otherwise, with several important applications, from more accurate therapeutic biomarkers to unique insights into protein associations.”

    A study of this dimension, technical complexity and impact inevitably results in game-changing and novel ways of looking at cancer diagnosis, study and potential treatments. As Gonçalves reminded us, “As part of the Cancer DepMap effort, this enables a proteomic lookup map to study cancer, from identifying potential therapeutic biomarkers to studying fundamental processes of protein regulation. This will hopefully become an important resource for the broad community.” Importantly, this pan-cancer proteomic map (ProCan-DepMapSanger), an invaluable resource, is already available online.

    And how is Gonçalves’ future research progressing from this major paper? “Looking forward, I’m interested in continuing the work of harnessing these large scale datasets and their integration. There are biological mechanisms that can only be studied and understood when taking a holistic approach integrating multiple molecular datasets, like the one we present here.”

    Interdisciplinarity is key in tackling the biggest challenges in contemporary biomedical science. The joining together of computational and molecular biology approaches represents one such unique hope that of fully tackling the emperor of all maladies.

  • Isabel Trancoso featured in “90 Segundos de Ciência” radio program

    Isabel Trancoso featured in “90 Segundos de Ciência” radio program

    Isabel Trancoso has been featured in 90 Segundos de Ciência, a popular science radio program broadcast by Antena 1 and co-produced by the radio station, Instituto de Tecnologia Química e Biológica António Xavier (ITQB NOVA) and Faculdade de Ciências Sociais e Humanas (FCSH NOVA).

    In 90 Segundos de Ciência, researchers have a minute-and-a-half to explain their research work to a wide audience, focusing on a particular project they are spearheading.

    In today’s episode, Isabel Trancoso INESC-ID researcher in the Human Language Technologies Research Area and Full Professor at Instituto Superior Técnico talks about her CMU Portugal-funded project that explores how to safely and privately detect the identity of a speaker in a recording of their voice.

    To hear more on how INESC-ID researchers are keeping who we hear safe, tune in to Isabel Trancoso’s episode.

  • The July 2022 INESC-ID newsletter is out!

    The July 2022 INESC-ID newsletter is out!

    The July 2022 issue of NEWS-ID — the INESC-ID Newsletter — is out!

    Containing recent news from our researchers and their projects, open positions and some extra bits of content, our monthly newsletter is a great one-stop spot for great content on computer science and electrical and computer engineering. The July 2022 newsletter is available here.

    You can subscribe to our monthly newsletter here.

  • INESC-ID researcher Francisco C. Santos elected vice-president of FCT

    INESC-ID researcher Francisco C. Santos elected vice-president of FCT

    Francisco C. Santos — INESC-ID Artificial Intelligence for People and Society (AIPS) researcher and Full Professor at the Department of Computer Science and Engineering of Instituto Superior Técnico — has been elected as the new vice-president of FCT, the Portuguese Foundation for Science and Technology (Fundação para a Ciência e Tecnologia). Santos joins Madalena Alves — FCT’s new president and Full Professor of Environmental Biotechnology and Bioengineering at Universidade do Minho — in the governing board of FCT.

    Before taking on the vice-presidency of FCT, Santos has led an accomplished teaching and research career focused on applying and developing computational tools to understand collective dynamics and decision-making in social and life sciences. Having received his PhD in Computer Science from the Université Libre de Bruxelles (ULB), Santos was a researcher at the Machine Learning Group of ULB and subsequently Investigador Auxiliar at the Centre for Artificial Intelligence of NOVA. In 2016 Santos was awarded the CGD / University of Lisbon prize in Computer Science and, the following year, the 2017 Young Scientist Award for Socio-Econophysics of the German Physical Society.

    Santos will be sworn in as vice-president of FCT in a ceremony attended by Elvira Fortunato, the Minister of Science, Technology and Higher Education, this afternoon.

     

    Photo credit: IST UL.

  • Rui Prada completes his Habilitation in Computer Science and Engineering at Instituto Superior Técnico

    Rui Prada completes his Habilitation in Computer Science and Engineering at Instituto Superior Técnico

    Rui Filipe Fernandes Prada INESC-ID researcher within the Artificial Intelligence for People and Society Research Area and Associate Professor at the Department of Computer Science and Engineering of Instituto Superior Técnico has today successfully completed his Habilitation (Agregação) in Computer Science and Engineering.

    Across two sessions, on 28th and 29th June 2022, Prada presented the course unit report Specialisation in Games” and the seminar “Human–Agent Interaction – Building Socially Intelligent Agents in Games.

    Our warmest congratulations to Rui!

  • HATE COVID-19.PT: Detecting hate speech in social media

    HATE COVID-19.PT: Detecting hate speech in social media

    A few weeks ago, the team that brought the FCT-funded HATE COVID-19.PT project to life met at INESC-ID. Since May 2021, HATE COVID-19.PT has developed methods for semi-automatically creating a large-scale Portuguese annotated corpus covering online hate speech, while exploring how the information in that annotated corpus can support hate speech detection, allowing users to visualize the metrics extracted from data.

    Coordinated by Paula Cristina Quaresma da Fonseca Carvalho, researcher within the INESC-ID Information and Decision Support Systems (IDSS) Research Area, and with the participation of three other IDSS researchers (Mário Jorge Costa Gaspar da Silva, Paula Cristina Quaresma da Fonseca Carvalho and Danielle Caled Vieira), two researchers from the Human Language Technologies (HLT) Research Area (Ricardo Daniel Santos Faro Marques Ribeiro and Fernando Manuel Marques Batista) and Cláudia Silva (researcher at ITI-LARSyS), HATE COVID-19.PT saw its results presented and discussed in a one-day workshop that took place on 17 May.

    We spoke with Paula Carvalho about this exciting project and the May workshop:

    How did the project come about and what were its initial objectives?

    This research project was one of the applications approved for funding by the Fundação para a Ciência e a Tecnologia (FCT), within the scope of the call for special support for projects on hate speech. The idea of ​​submitting an application for this call made perfect sense at the time, since some of the researchers that make up the HATE COVID-19.PT team were involved in projects, more directly or indirectly, related to hate speech (namely the analysis and detection of misinformation in the media and in social networks). In addition to the linguistic and computational challenges that the recognition of hate speech presents, this phenomenon, increasingly present in social networks, constitutes a clear violation of human rights, as well as one of the greatest threats to social cohesion and democratic societies. From the point of view of natural language processing, it is crucial to create resources that allow, on the one hand to understand the linguistic and discursive materialization of this phenomenon and, on the other, to support the creation of learning models that allow its automatic recognition. However, with regard specifically to the Portuguese language, the existing resources are scarce and the geographic and temporal dimensions, crucial for the characterization of the evolution of online hate speech in the Portuguese context (also one of the objectives of this project), are not normally taken into account.

    In a simplified way, the initial objectives of this project consisted in the creation of solid resources that allowed for the investigation of the main linguistic and discursive strategies underlying the materialization of direct and indirect hate speech, taking into account the different target groups studied, in the Portuguese context, as well as how to assess the impact of the pandemic on the evolution of online hate speech in Portugal. In addition, we proposed to explore semi-supervised learning approaches to address the limitations associated with manual annotation approaches. The manually and automatically annotated data would then be used to develop learning models that allow for the recognition of online hate speech in Portuguese.

    What was the purpose of the May 17th workshop, and what is your perception of how the workshop went?

    The workshop we organized had two main objectives: to share the main research results achieved during the project with the community and to involve civil society in their discussion. In our view, the dialogue between researchers and society, sometimes underestimated by the scientific community, is fundamental.

    In the initial phase of this project we created three focus groups, made up of members of communities that are frequently the target of hate speech, offline and online, in Portugal, namely the Afro-descendant community, the Roma community and the LGBTQ+ community. This work, of a qualitative nature, was crucial to better understand this phenomenon and its impact on these communities. Therefore, for the project team, it made perfect sense to once again involve these communities in the workshop, not just as guests, but as participants with an active voice. Additionally, Paula Cardoso (founder of Afrolink), Hélder Bértolo (chairman of the board of Opus Diversidades) and Vanessa Lopes (currently an intern journalist at the Público and activist for the rights of the Roma Community) participated in the round table dedicated to the discussion of the results of this project.

    We were also able to include the intervention of Portuguese specialists in the project who have been approaching the topic of hate speech in the scope of their research, namely Marisa Torres Silva, Professor at Nova FCSH and researcher at ICNOVA, and Rita Guerra, Professor at ISCTE and researcher at CIS-ISCTE.

    Personally, I believe that it was a very important event, allowing for the sharing of knowledge, in a multidisciplinary perspective, while also highlighting stimulating and enriching interventions by the audience.

    Now that the project has come to an end, what seems to be the biggest conclusions of the project and what impact did they have?

    As I mentioned earlier, one of the main objectives that we defined within the scope of this project was the creation of linguistic resources, in particular annotated corpora (that is, data collections), which are scarce for Portuguese, in order to understand and characterize this phenomenon and ultimately contribute to its automatic recognition. This objective was accomplished and, at this moment, we are able to say that we have created perhaps the largest collection of data (on hate speech) annotated for Portuguese, considering several dimensions of the problem that are typically little explored or explored in an unsystematic way in the literature. In particular, around 200,000 comments were manually recorded, focusing on three target groups (Afro-descendant community, Roma and LGBTQ+) and two social networks (Twitter and YouTube). The annotation system includes, for example, the distinction between hate speech, offensive speech and counter-narratives, as well as the main rhetorical and discursive strategies used in the analyzed comments.

    It should also be noted that the annotation process involved both individuals from the target communities and individuals who do not belong to any vulnerable or historically marginalized group. Although we cannot and should not make generalizations (taking into account the size and characteristics of the sample) there are some interesting conclusions that we can be drawn from the studies carried out. For example, we observed that indirect hate speech (implicit or covert) is as frequent or more frequent on social networks than direct hate speech. Indirect hate speech is often anchored in superficial and fallacious argumentation strategies, including the appeal to fear, the call to action (e.g., the appeal to vote in far-right parties); moreover, this type of discourse is also materialized through rhetorical figures such as irony or sarcasm. With particular reference to a study of a qualitative nature carried out in the initial phase of this project, which involved the creation of focus groups with members of the targeted communities, we were able to conclude that indirect hate speech is considered more harmful than direct hate speech by target groups, even when this type of discourse is expressed through praise or humor. These are, therefore, strategies that seek to normalize and perpetuate stereotypes associated with target groups, often present in comments identified as containing hate speech. We also observed that, according to the data we analyzed, namely on Twitter, it is not possible to establish a direct relationship between the pandemic and the increase in hate speech on social networks in Portugal. In fact, the highest peaks of online hate speech recorded during that period seem to be closely related to events, in the international and national paradigm, that involve the targeted communities (e.g., the murder of G. Floyd and the Marega case).

    The results achieved in this project are therefore fundamental to support the development of models for automatic detection of hate speech in Portuguese. At the moment, the linguistic resources created, pioneers for the analysis of hate speech in Portuguese, are being explored within the scope of the master’s work of two research fellows, hired within the scope of this project, who will present their master’s dissertations, coming soon to Instituto Superior Técnico.

  • Two robots walk into a bar: the AGENTS project is featured in Público

    Two robots walk into a bar: the AGENTS project is featured in Público

    Automatic generation of humor for social robots (AGENTS) — an FCT- and Carnegie Mellon University (CMU) Portugal-funded project — has been featured in the Portuguese newspaper Público.

    Based at INESC-ID and ISCTE and coordinated by Ana Paiva, researcher within the INESC-ID Artificial Intelligence for People and Society Research Area and Professor at Instituto Superior Técnico, AGENTS explores how humour can be used to create more naturalistic and lifelike interactions between robots and other agents. In this piece, Raquel Oliveira and Inês Batina (both early career researchers at INESC-ID), as well as Patrícia Arriaga (researcher at ISCTE) and Ana Paiva, provide a glimpse at the recent set of human-robot interaction experiments that were conducted at ISCTE with close to 60 subjects.

    The full piece can be accessed here and more details on the project can be viewed here.

  • Inês Lynce featured in Artificial Intelligence podcast

    Inês Lynce featured in Artificial Intelligence podcast

    Inês Lynce President of INESC-ID, as well as researcher within the Automated Reasoning and Software Reliability (ARSR) Research Area, Full Professor at Instituto Superior Técnico and co-director of the CMU Portugal Program has been featured in Gato de Schrödinger (“Schrödinger’s cat”), Exame Informática‘s podcast.

    In this episode, titled Inteligência Artificial: ameaça ou oportunidade? (“Artificial Intelligence: threat or opportunity”), Professor Lynce discusses the possibilities and challenges of Artificial Intelligence with João Casto, Professor at Nova School of Business and Economics, and Sara Sá, Exame Informática‘s science and technology journalist.

    Please have a listen, and a look, at this very special episode here.

  • The June 2022 INESC-ID newsletter is out!

    The June 2022 INESC-ID newsletter is out!

    The June 2022 issue of NEWS-ID — the INESC-ID Newsletter — is out!

    Containing recent news from our researchers and their projects, open positions and some extra bits of content, our monthly newsletter is a great one-stop spot for great content on computer science and electrical and computer engineering. The June 2022 newsletter is available here.

    You can subscribe to our monthly newsletter here.